skbio.diversity.alpha.observed_otus

skbio.diversity.alpha.observed_otus(counts)

Calculate the number of distinct OTUs.

Parameters:

counts1-D array_like, int

Vector of counts.

Returns:

int

Distinct OTU count.

Warning

observed_otus is deprecated as of 0.6.0 due to its usage of the historical term “OTU”.

See also

sobs

Notes

observed_otus is an alias for sobs.