skbio.diversity.alpha.heip_e

skbio.diversity.alpha.heip_e(counts)

Calculate Heip’s evenness measure.

Heip’s evenness is defined as:

\[\frac{(e^H-1)}{(S-1)}\]

where \(H\) is the Shannon-Wiener entropy of counts (using logarithm base \(e\)) and \(S\) is the number of taxa in the sample.

Parameters:

counts1-D array_like, int

Vector of counts.

Returns:

double

Heip’s evenness measure.

See also

shannon

pielou_e

Notes

Heip’s evenness measure was originally described in [1].

References

[1]

Heip, C. 1974. A new index measuring evenness. J. Mar. Biol. Ass. UK., 54, 555-557.