skbio.io.registry.IORegistry

class skbio.io.registry.IORegistry

Create a registry of formats and implementations which map to classes.

Methods

add_format	Add a format to the registry.
create_format	Create new file formats.
get_reader	Locate the reader for a format and class.
get_sniffer	Locate the sniffer for a format.
get_writer	Locate the writer for a format and class.
list_read_formats	Return a list of available read formats for a given cls type.
list_write_formats	Return a list of available write formats for a given cls type.
read	Read a file as certain format into an object.
remove_format	Remove a format from the IORegistry.
sniff	Detect the format of a given file and suggest kwargs for reading.
write	Write an object as certain format into a file.

Special methods (inherited)

__eq__	Return self==value.
__ge__	Return self>=value.
__getstate__	Helper for pickle.
__gt__	Return self>value.
__hash__	Return hash(self).
__le__	Return self<=value.
__lt__	Return self<value.
__ne__	Return self!=value.
__str__	Return str(self).

Details