skbio.io.registry.IORegistry

class skbio.io.registry.IORegistry

Create a registry of formats and implementations which map to classes.

Built-ins

__eq__(value, /)	Return self==value.
__ge__(value, /)	Return self>=value.
__getstate__(/)	Helper for pickle.
__gt__(value, /)	Return self>value.
__hash__(/)	Return hash(self).
__le__(value, /)	Return self<=value.
__lt__(value, /)	Return self<value.
__ne__(value, /)	Return self!=value.
__str__(/)	Return str(self).

Methods

add_format(format_object)	Add a format to the registry.
create_format(*args, **kwargs)	Create new file formats.
get_reader(format_name, cls)	Locate the reader for a format and class.
get_sniffer(format_name)	Locate the sniffer for a format.
get_writer(format_name, cls)	Locate the writer for a format and class.
list_read_formats(cls)	Return a list of available read formats for a given cls type.
list_write_formats(cls)	Return a list of available write formats for a given cls type.
monkey_patch()	Monkey-patch read and write methods onto registered classes.
read(file[, format, into, verify])	Read a file as certain format into an object.
sniff(file, **kwargs)	Detect the format of a given file and suggest kwargs for reading.
write(obj, format, into, **kwargs)	Write an object as certain format into a file.